Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888111.1_cds_XP_016442654.1_37893
CDS Infomation

[gene=LOC107768057] [db_xref=GeneID:107768057] [protein=pentatricopeptide repeat-containing protein At5g66520-like] [protein_id=XP_016442654.1] [location=join(82067..83381,83473..83663)] [gbkey=CDS]
Sequence

ATGGCTGCTGCTTCCCTAAGCGGCCCAGTGCCCAAGCAAAATATTCTAGAATTGCAAAAT
GGAAGAGGTAATAAAATCCCAAGCAGTGTTCTGTTGCTCCAGATGTGTCGCCAAAACAAG
GAAGTCAAACAATTACATAGCCAACTGATTATTTCAGGATTGATTCGTCGCCCTCCAAAT
GCAGCAAGGCTATTAGAATCCTATGTTGGAGTGTCTGAAACTGATGATGCATTGTTACTT
TTTAAATCATCAATTCAATCACCTGATACCTTTGCTTATAATGTTATGATCAGAGGTCTG
ATTCTTAGCAAGCGGCCTAAGGGGTCACTTTTGTTGTATGAACAATTATTATCAGAGGGT
CTTGTACCAGATAGCCATACCTATACTTTTGTTCTCAAAGCATGTTCTCATTTGAAAGCT
ATTCTTCAAGGTAAACAAGTACATGCACAAATTATCAAGATTGGCATAGGACCAAATACC
CACGTTTGTAGCTCTCTAATTTCTATGTATTCCTATGCTGGAAGCATGGAATCTGCAAGA
CAAGTTCTTGATGAATATTATGAGGATAATAATGACATTTGTCCCCTTAACTCCATGATT
ACCGGTTATATGAATGAGGGCCTTGTGGAAAAGGCTGAAGAAATCTTTGATACAATGGAA
AATAAGGATACTGCAACTTGGAGTGCAATGTTATCAGGGTACACTAAAAATGGTATGCAC
GACGTGGCACTTGTCACCTTTCAGAAAATGATGAATTATAGAGTTCCACTGAATGAATCT
TCACTTGTGTGCACTCTATCAGCCTGTGGAGCGTTGGGAGCTTTGGATCAGGGAAGATGG
ATACACACGTATATCATAAACAAGAGAGAAATTGTAATGAGTGCCAATCTTGGTACTGCT
TTAGTTGACGTGTATGCCAAGTGTGGGTGCATTGAATTTAGTTATCAGTTGTTTAAGAAT
ATGCCACAGAGAGATGTTGTAACTTGGGGAGTGATCATTTCAGGTTTTGCAACACATGGG
CAAGCCAAGAAATGCTTTCAACTATTTGATGAGATGATTGCGTCCGGAGTTGAGCCAAAT
GGAGTCATCTTTGTGGCTATCCTCTCTGCCTGTTCTCATGCAGGGCAAGTCGGACAGGGA
TGTCACTACTTCAACCAAATGGTGTATCAGTTCGGAATTAGACCATCCATTGAGCATTTT
GGATGCATGGTAGATCTTCTTGGCCGTGCTGGGAGGCTTGCAGAAGCAGAACAAGTCATT
TTATCGATGCCGGAAGAACCTAACTCGATTGTATTGGGCGCATTGCTTAATGCTTCATCT
CTGTTTGCTAATAATGGAGAAGGGTACGAGATTAAAAAGTTGGTCAAGGATGAAGATTTG
GTAGCTAGATGTGGCTTGAGTAATATTCAGGTGGATGGGGTGGTTCACGAGTTCATGGTC
AGTGATATCGCGAATAACAGGGCCCGAGATATCTACGAGGCATTAGGAGGATTAGTAGAT
CAATAA

Peptide Sequence

PEP ID

XP_016442654.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Nicotiana tabacum]
Sequence

MAAASLSGPVPKQNILELQNGRGNKIPSSVLLLQMCRQNKEVKQLHSQLIISGLIRRPPN
AARLLESYVGVSETDDALLLFKSSIQSPDTFAYNVMIRGLILSKRPKGSLLLYEQLLSEG
LVPDSHTYTFVLKACSHLKAILQGKQVHAQIIKIGIGPNTHVCSSLISMYSYAGSMESAR
QVLDEYYEDNNDICPLNSMITGYMNEGLVEKAEEIFDTMENKDTATWSAMLSGYTKNGMH
DVALVTFQKMMNYRVPLNESSLVCTLSACGALGALDQGRWIHTYIINKREIVMSANLGTA
LVDVYAKCGCIEFSYQLFKNMPQRDVVTWGVIISGFATHGQAKKCFQLFDEMIASGVEPN
GVIFVAILSACSHAGQVGQGCHYFNQMVYQFGIRPSIEHFGCMVDLLGRAGRLAEAEQVI
LSMPEEPNSIVLGALLNASSLFANNGEGYEIKKLVKDEDLVARCGLSNIQVDGVVHEFMV
SDIANNRARDIYEALGGLVDQ

Transcript Sequence

Gene sequence data has not been registered.